Indian Nucleotide Data Archive - Controlled Access


Submitted Study ListBack

S. No INDA-CA Accession Study Title Study Description Run count Centre Name Submitted On
1 INCARP000055 Genome assembling and analysis of SARSCoV2 virus under Indian SARSCoV2 Genomics Consortium - PI The study is part of Indian SARSCoV2 Genomics Consortium 3 PI 2022-05-24 11:48:42.735
2 INCARP000181 Comparative genomics and genome evolution of citrus Four cultivars of Mandarin, i.e., Nagpur Mandarin, Khasi Mandarin, Sikkim Mandarin, and Coorg Mandarin, and two cultivars of acid lime, i.e., NRCC7, and NRCC8, were resequenced. The study aims to do a comparative study with the other citrus genomes already available in the public database and to study the genome evolution of Indian cultivars. The genome data is also used to identify SNPs with peculiar characteristics like taste and flowering more than once a year. 6 ICAR Central Citrus Research Institute Nagpur 2022-10-26 12:37:22.832
3 INCARP000183 Shoot transcriptome of chickpea Shoot transcriptome of chickpea under Fusarium wilt stress for differential gene expression analysis 4 Dr Rajendra Prasad Central Agricultural University 2022-11-02 13:00:28.668
4 INCARP000205 Whole genome re sequencing of cassava Whole genome resequencing of two elite breeding lines of cassava 2 ICAR Central Tuber Crops Research Institute 2023-01-19 15:49:22.638
5 INCARP000207 Rice Landraces resequencing Resequencing of Rice Landraces for biotic and abiotic trait study 1 ICAR-National Bureau of Plant Genetic Resources 2023-01-27 09:33:52.11
6 INCARP000208 Rice Landraces resequencing Re-sequencing of Rice lanraces for the identification of genes related to biotic and abiotic stresses. 1 ICAR-National Bureau of Plant Genetic Resources 2023-01-27 10:59:36.343
7 INCARP000209 Rice Landraces resequencing Re-sequencing of Rice landraces for the identification of genes related to biotic and abiotic stress responses. 1 ICAR-National Bureau of Plant Genetic Resources 2023-01-27 11:30:07.411
8 INCARP000211 Rice Landraces resequencing Re-sequencing of Rice landraces for the identification of genes related to biotic and abiotic stress responses. 1 ICAR-National Bureau of Plant Genetic Resources 2023-01-27 11:45:52.351
9 INCARP000212 Rice Landraces resequencing Re-sequencing of Rice landraces for the identification of genes related to biotic and abiotic stress responses. 1 ICAR-National Bureau of Plant Genetic Resources 2023-01-27 11:54:32.994
10 INCARP000213 Rice Landraces resequencing Re-sequencing of Rice landraces for the identification of genes related to biotic and abiotic stress responses. 1 ICAR-National Bureau of Plant Genetic Resources 2023-01-27 12:00:13.377
11 INCARP000214 Rice Landraces resequencing Re-sequencing of Rice landraces for the identification of genes related to biotic and abiotic stress responses. 1 ICAR-National Bureau of Plant Genetic Resources 2023-01-27 12:07:18.965
12 INCARP000217 Rice Landraces resequencing Re-sequencing of Rice landraces for the identification of genes related to biotic and abiotic stress responses. 1 ICAR-National Bureau of Plant Genetic Resources 2023-02-01 09:10:12.038
13 INCARP000218 Rice Landraces resequencing Re-sequencing of Rice landraces for the identification of genes related to biotic and abiotic stress responses. 1 ICAR-National Bureau of Plant Genetic Resources 2023-02-01 09:37:19.249
14 INCARP000223 CRC CRC 20 Govind Ballabh Pant Institute of Post Graduate Medical education and Research 2023-03-15 15:11:27.651
15 INCARP000239 Genotyping of linseed (Linum usitatissimum (Linn.)) germplasm accessions conserved at National Genebank (NGB), ICAR-NBPGR, New Delhi Linseed germplasm accessions conserved in NGB, ICAR NBPGR were genotyped using whole genome resequencing approach. WGS was carried out using Illumina NovaSeq 6000 sequencing platform. 2462 ICAR National Bureau of Plant Genetic Resources, New Delhi 2023-04-12 15:24:29.188
16 INCARP000248 WGS of Mycobacterium orygis from Indian water buffalo in Haryana India WGS of Mycobacterium orygis from Indian water buffalo in Haryana India 1 Lala Lajpat Rai University of Veterinary and Animal Sciences Hisar Haryana 2023-04-26 16:45:53.657
17 INCARP000251 WGS of Mycobacterium orygis from Indian water buffalo in Haryana, India WGS of Mycobacterium orygis from Indian water buffalo in Haryana, India 1 Lala Lajpat Rai University of Veterinary and Animal Sciences Hisar, Haryana 2023-05-01 10:02:09.677
18 INCARP000256 Resequencing of Lentil germplasm for diversity analysis Resequencing of 143 diverse lentil accessions including indegenous, exotic accessions, varieties, land races and wild relatives were carried out to mine the functional SNPs for discovery of trait specific putative candidate genes. 143 National Institute of Plant Genome Research, New Delhi 2023-05-11 22:42:51.211
19 INCARP000260 CRC Transcriptome sequencing 20 Govind Ballabh Pant Institute of Post Graduate Medical education and Research 2023-05-24 17:17:42.13
20 INCARP000269 Transcriptome analysis of lentil under iron deficiency treatment Understanding transcriptional dynamics of two lentil genotypes under iron deficiency condition 8 National Institute of Plant Genome Research 2023-06-14 12:43:41.311
21 INCARP000273 Carthamus tinctorius Genome Assembly A2 New and improved genome assembly for Safflower using PacBio HiFi reads, Optical Mapping and Hi-C 121 Department of Botany, University of Delhi 2023-07-09 22:10:01.907
22 INCARP000274 Brassica juncea whole genome resequencing NOT AVAILABLE 127 NATIONAL INSTITUTE OF PLANT GENOME RESEARCH 2023-07-25 00:59:44.407
23 INCARP000275 Ensemble learning for higher diagnostic precision in schizophrenia using peripheral blood gene expression profile This study developed robust models for higher diagnostic precision in psychiatric disorders. 20 Symbiosis School of Biological Sciences 2023-11-06 11:43:01.561
24 INCARP000276 Mission Program on Pediatric Rare Genetic Disorders Mission Program on Pediatric Rare Genetic Disorders 417 Dr Ashwin Dalal, Centre for DNA Fingerprinting and Diagnostics 2023-11-07 11:13:41.566
25 INCARP000292 Multiomics characterization of oral field cancerization Investigation of molecular genomic features of oral field cancerization 6 Biotechnology Research Innovation Council-National Institute of Biomedical Genomics 2024-04-08 10:36:28.012
26 INCARP000295 Mutational landscape of an Indian OSCC-GB cohort Mutational landscape of a South Indian OSCC-GB cohort 76 Biotechnology Research Innovation Council-National Institute of Biomedical Genomics 2024-04-09 10:51:39.395
27 INCARP000296 Small RNA sequencing data of lentil under control and iron deficienct condition Small RNA sequencing of iron deficiency sensitive genotype under control and iron deficiency condition 4 National Institute of Plant Genome Research 2024-05-14 17:29:54.232
28 INCARP000298 small RNA sequencing analysis of chronic pancreatitis and pancreatic ductal adenocarcinoma small RNA sequencing analysis of chronic pancreatitis and pancreatic ductal adenocarcinoma patients to identify potential biomarkers. 49 National institute of biomedical genomics 2024-06-07 16:27:27.14
29 INCARP000300 VNCI Breast Cancer Whole genome sequencing identifies genome instability and failure of homologous recombination repair as hallmark of therapy resistance in a 5 year followup cohort of ER PR positive HER2 negative breast cancer patients 40 BRIC-National Institute of Biomedical genomics 2024-06-12 16:14:23.906
30 INCARP000301 ddRAD sequencing of bi-parental RIL mapping population ddRAD sequencing of bi parental RIL mapping population 1 National Institute of Plant Genome Research 2024-08-20 17:13:31.106
31 INCARP000303 Resequencing of heat sensitive and tolerant lentil genotypes Resequencing of heat sensitive and tolerant lentil genotypes 20 National Institute of Plant Genome Research 2024-09-21 19:43:35.846
32 INCARP000305 Genotyping of cowpea accessions conserved at National Genebank, ICAR-National Bureau of Plant Genetic Resources, New Delhi Genotyping of cowpea accessions conserved at National Genebank, ICAR-National Bureau of Plant Genetic Resources, New Delhi using ddRAD seq approach 419 ICAR-National Bureau of Plant Genetic Resources, New Delhi 2024-11-19 16:41:55.374